Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
phoR_1Alkaline phosphatase synthesis sensor protein PhoR. (601 aa)    
Predicted Functional Partners:
baeR
Transcriptional regulatory protein BaeR.
 
 0.995
hprK
HPr kinase/phosphorylase.
     0.911
bfmBAB
2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.858
cheA_1
Chemotaxis protein CheA.
  
 
 0.783
basR
Transcriptional regulatory protein BasR.
 
 
 0.770
phoB_2
Phosphate regulon transcriptional regulatory protein PhoB.
 
 
 0.754
phoP_2
Transcriptional regulatory protein PhoP.
 
 
 0.750
ctrA
Cell cycle response regulator CtrA.
 
 
 0.742
divK
Polar-differentiation response regulator DivK.
  
 
   0.737
mprA_1
Response regulator MprA.
 
 
 0.722
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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