STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_2957NADP-reducing hydrogenase subunit HndC. (614 aa)    
Predicted Functional Partners:
gltD_3
Glutamate synthase [NADPH] small chain.
 
 0.999
hoxF
NAD-reducing hydrogenase HoxS subunit alpha.
 
 0.993
nqo2
NADH-quinone oxidoreductase chain 2.
 
 
 0.988
nqo1
NADH-quinone oxidoreductase chain 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
 
 
 0.988
porB
Pyruvate-flavodoxin oxidoreductase.
 
 
 0.987
hycE
Formate hydrogenlyase subunit 5 precursor.
  
 
 0.977
BVIR_1753
Hypothetical protein.
   
 
 0.959
hycG
Formate hydrogenlyase subunit 7.
  
 
 0.847
gltD_1
Glutamate synthase [NADPH] small chain.
   
 0.824
hycD
Formate hydrogenlyase subunit 4.
  
 
 0.819
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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