Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BVIR_1662 | cheR_1 | BVIR_1662 | BVIR_477 | Blue-light-activated histidine kinase. | Chemotaxis protein methyltransferase Cher2. | 0.973 |
| BVIR_1662 | cheR_2 | BVIR_1662 | BVIR_507 | Blue-light-activated histidine kinase. | Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.974 |
| BVIR_1662 | kamA_2 | BVIR_1662 | BVIR_2978 | Blue-light-activated histidine kinase. | L-lysine 2,3-aminomutase. | 0.426 |
| cheR_1 | BVIR_1662 | BVIR_477 | BVIR_1662 | Chemotaxis protein methyltransferase Cher2. | Blue-light-activated histidine kinase. | 0.973 |
| cheR_1 | cheR_2 | BVIR_477 | BVIR_507 | Chemotaxis protein methyltransferase Cher2. | Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.920 |
| cheR_1 | kamA_2 | BVIR_477 | BVIR_2978 | Chemotaxis protein methyltransferase Cher2. | L-lysine 2,3-aminomutase. | 0.426 |
| cheR_2 | BVIR_1662 | BVIR_507 | BVIR_1662 | Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | Blue-light-activated histidine kinase. | 0.974 |
| cheR_2 | cheR_1 | BVIR_507 | BVIR_477 | Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | Chemotaxis protein methyltransferase Cher2. | 0.920 |
| cheR_2 | kamA_2 | BVIR_507 | BVIR_2978 | Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | L-lysine 2,3-aminomutase. | 0.426 |
| efp_1 | kamA_2 | BVIR_2980 | BVIR_2978 | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | L-lysine 2,3-aminomutase. | 0.669 |
| efp_1 | yjeA | BVIR_2980 | BVIR_2979 | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Elongation factor P--(R)-beta-lysine ligase. | 0.978 |
| kamA_2 | BVIR_1662 | BVIR_2978 | BVIR_1662 | L-lysine 2,3-aminomutase. | Blue-light-activated histidine kinase. | 0.426 |
| kamA_2 | cheR_1 | BVIR_2978 | BVIR_477 | L-lysine 2,3-aminomutase. | Chemotaxis protein methyltransferase Cher2. | 0.426 |
| kamA_2 | cheR_2 | BVIR_2978 | BVIR_507 | L-lysine 2,3-aminomutase. | Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.426 |
| kamA_2 | efp_1 | BVIR_2978 | BVIR_2980 | L-lysine 2,3-aminomutase. | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.669 |
| kamA_2 | lysA_1 | BVIR_2978 | BVIR_172 | L-lysine 2,3-aminomutase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.800 |
| kamA_2 | yabJ_1 | BVIR_2978 | BVIR_2977 | L-lysine 2,3-aminomutase. | Enamine/imine deaminase. | 0.723 |
| kamA_2 | yjeA | BVIR_2978 | BVIR_2979 | L-lysine 2,3-aminomutase. | Elongation factor P--(R)-beta-lysine ligase. | 0.883 |
| lysA_1 | kamA_2 | BVIR_172 | BVIR_2978 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | L-lysine 2,3-aminomutase. | 0.800 |
| yabJ_1 | kamA_2 | BVIR_2977 | BVIR_2978 | Enamine/imine deaminase. | L-lysine 2,3-aminomutase. | 0.723 |
page 1 of 2