STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnL_3Nitrogen regulation protein NR(II). (512 aa)    
Predicted Functional Partners:
bfmBAB
2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.960
basR
Transcriptional regulatory protein BasR.
 
 
 0.872
cheA_1
Chemotaxis protein CheA.
  
 
 0.797
merA
Mercuric reductase.
   
  0.793
ydjZ_2
TVP38/TMEM64 family inner membrane protein YdjZ.
       0.722
BVIR_738
Hypothetical protein.
  
     0.703
regB
Sensor histidine kinase RegB.
  
     0.674
phoB_2
Phosphate regulon transcriptional regulatory protein PhoB.
 
 
 0.661
pleD_2
Response regulator PleD.
 
 
 0.644
regA
Photosynthetic apparatus regulatory protein RegA.
 
 
 
 0.632
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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