STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhbA2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase. (253 aa)    
Predicted Functional Partners:
dhbE_1
2,3-dihydroxybenzoate-AMP ligase.
 0.994
dhbB
Isochorismatase.
 
 0.994
dhbC
Isochorismate synthase DhbC.
 
  
 0.926
entB
Isochorismatase.
 
  
 0.871
dhbF_1
Dimodular nonribosomal peptide synthase.
 
 
 0.862
phzD_1
Putative isochorismatase.
  
 0.841
sfp
4'-phosphopantetheinyl transferase sfp; Belongs to the P-Pant transferase superfamily.
  
 
 0.802
mbtH
MbtH-like protein.
 
  
 0.714
lgrD_1
Carboxylic acid reductase.
  
 
 0.550
besA
Ferri-bacillibactin esterase BesA.
  
    0.530
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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