STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sfp4'-phosphopantetheinyl transferase sfp; Belongs to the P-Pant transferase superfamily. (282 aa)    
Predicted Functional Partners:
dhbF_1
Dimodular nonribosomal peptide synthase.
 
 
 0.948
BVIR_2837
Holo-(acyl carrier protein) synthase 2; Belongs to the P-Pant transferase superfamily.
  
  
 
0.927
coaE
Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
     
 0.903
tycC_2
Tyrocidine synthase 3.
 
 
 0.888
tycC_3
Tyrocidine synthase 3.
 
 
 0.817
dhbA
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase.
  
 
 0.802
tycC_4
Tyrocidine synthase 3.
 
 
 0.796
fabD
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.711
dhbB
Isochorismatase.
  
  
 0.700
dhbE_1
2,3-dihydroxybenzoate-AMP ligase.
  
    0.697
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.