Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
marARegulatory protein PchR. (330 aa)    
Predicted Functional Partners:
BVIR_3133
Hemin transport system permease protein HmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.605
BVIR_3134
Corrinoid ABC transporter substrate-binding protein.
 
  
 0.602
fhuA_2
Ferrichrome-iron receptor precursor.
 
   
 0.582
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.550
fhuC_4
Iron(3+)-hydroxamate import ATP-binding protein FhuC.
 
  
 0.509
yvoA_1
HTH-type transcriptional repressor YvoA.
  
  
 0.474
besA
Ferri-bacillibactin esterase BesA.
 
  
 0.469
BVIR_196
Glyoxalase-like domain protein.
 
    0.417
cheA_1
Chemotaxis protein CheA.
      
 0.402
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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