STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_3147Hypothetical protein. (69 aa)    
Predicted Functional Partners:
BVIR_1343
Zinc-finger domain protein.
 
     0.638
BVIR_2730
AsmA family protein.
  
     0.601
BVIR_37
Hypothetical protein.
  
     0.534
BVIR_2772
MarR family protein.
  
     0.511
BVIR_3220
DNA polymerase III subunit delta.
  
     0.493
BVIR_3148
Cupin domain protein.
       0.490
BVIR_3149
Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.490
BVIR_2370
Hypothetical protein.
  
     0.484
BVIR_3019
Hypothetical protein.
  
     0.482
BVIR_2917
Hypothetical protein.
  
     0.475
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.