STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
addAATP-dependent helicase/nuclease subunit A; Belongs to the helicase family. UvrD subfamily. (1146 aa)    
Predicted Functional Partners:
BVIR_3194
PD-(D/E)XK nuclease superfamily protein.
   
 0.982
BVIR_3192
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE.
     
 0.844
divL
Sensor protein DivL.
 
    0.817
BVIR_3193
Bifunctional IPC transferase and DIPP synthase.
       0.817
BVIR_2311
ATP-dependent RecD-like DNA helicase.
  
 
 0.816
BVIR_2830
ATP-dependent RecD-like DNA helicase.
  
 
 0.816
mobA
Mobilization protein A.
  
 
 0.816
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
   
 0.746
BVIR_686
DNA polymerase III subunit chi.
  
   
 0.733
BVIR_3268
Putative glutathione S-transferase.
  
     0.727
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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