Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BVIR_335Antilisterial bacteriocin subtilosin biosynthesis protein AlbA. (366 aa)    
Predicted Functional Partners:
BVIR_336
B12 binding domain protein.
  
  
 0.796
BVIR_337
Type I phosphodiesterase / nucleotide pyrophosphatase.
 
     0.780
menE_1
Putative sulfoacetate--CoA ligase.
       0.773
BVIR_331
2'-N-acetylparomamine deacetylase.
       0.749
fabG_1
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
       0.746
acpP_1
Acyl carrier protein.
       0.746
BVIR_338
Type I phosphodiesterase / nucleotide pyrophosphatase.
 
     0.591
gph_1
Phosphoglycolate phosphatase.
       0.486
BVIR_340
N-acetylneuraminate epimerase.
       0.476
BVIR_341
Hypothetical protein.
       0.446
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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