Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dgoA2-dehydro-3-deoxy-6-phosphogalactonate aldolase. (212 aa)    
Predicted Functional Partners:
ydjH
2-dehydro-3-deoxygluconokinase.
 
  
 0.848
ycjS
Putative UDP-kanosamine synthase oxidoreductase subunit.
 
  
 0.720
glk
Glucokinase; Belongs to the bacterial glucokinase family.
 
  
 0.676
kdgR_1
Pectin degradation repressor protein KdgR.
 
   
 0.600
ydfH
Putative HTH-type transcriptional regulator YdfH.
 
   
 0.568
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
  
 0.552
tme
NADP-dependent malic enzyme.
   
  
 0.449
pgi_1
Glucose-6-phosphate isomerase.
  
  
 0.447
fucA
L-fuculose phosphate aldolase.
 
   
 0.408
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
      
 0.404
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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