STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thlA_1Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)    
Predicted Functional Partners:
BVIR_2156
Putative 3-hydroxyacyl-CoA dehydrogenase.
  
 0.998
fadB2_2
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 0.988
fadB2_1
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.983
acsA_1
Acetyl-coenzyme A synthetase.
  
 
 0.966
BVIR_370
Acyl-CoA dehydrogenase.
  
 0.961
porB
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.943
prpC
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
 0.938
aarA
Citrate synthase; Belongs to the citrate synthase family.
  
 0.938
fabG_9
Acetoacetyl-CoA reductase.
  
 0.924
leuA_2
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.922
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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