STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acsA_1Acetyl-coenzyme A synthetase. (566 aa)    
Predicted Functional Partners:
thlA_1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.970
porB
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.958
prpC
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
 0.951
aarA
Citrate synthase; Belongs to the citrate synthase family.
  
 0.951
aceB
Malate synthase A; Belongs to the malate synthase family.
   
 0.949
BVIR_370
Acyl-CoA dehydrogenase.
 
 
 0.936
acoD_1
Acetaldehyde dehydrogenase 2; Belongs to the aldehyde dehydrogenase family.
   
 0.933
mmsA
Methylmalonate-semialdehyde dehydrogenase [acylating].
   
 0.933
phbA
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.930
thlA_2
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.930
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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