STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csgAC-factor; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (229 aa)    
Predicted Functional Partners:
pepQ
Xaa-Pro dipeptidase.
  
   0.762
ndk_1
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 
 0.722
fabG_1
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
 
   0.720
panD_1
Aspartate 1-decarboxylase precursor; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
     
 0.663
lgrD_1
Carboxylic acid reductase.
  
 
 0.550
pfkB
Putative phosphofructokinase PfkB; Belongs to the carbohydrate kinase PfkB family.
   
    0.510
fabD
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.500
xecE
2-(S)-hydroxypropyl-CoM dehydrogenase.
  
     0.454
dhbA
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase.
  
     0.439
gltB_1
Ferredoxin-dependent glutamate synthase 1.
      
 0.420
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.