STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_435Biofilm formation regulator HmsP. (500 aa)    
Predicted Functional Partners:
cheA_1
Chemotaxis protein CheA.
 
  
 0.849
BVIR_2585
Flagellar hook-length control protein FliK.
  
    0.831
BVIR_996
Flagellar basal body P-ring biosynthesis protein FlgA.
  
    0.825
fliM_1
Flagellar motor switch protein FliM.
  
    0.818
BVIR_1002
Hypothetical protein.
  
    0.815
BVIR_991
Chemotactic signal-response protein CheL.
  
    0.814
fliN_1
Flagellar motor switch protein FliN.
  
    0.805
BVIR_2590
Flagellar assembly protein H.
  
    0.804
BVIR_1264
Hpt domain protein.
 
  
 0.800
fliL
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
    0.794
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.