Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ahcY_1 | cbs_1 | BVIR_3109 | BVIR_363 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | Putative cystathionine beta-synthase. | 0.938 |
ahcY_1 | mdeA_1 | BVIR_3109 | BVIR_492 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | Methionine gamma-lyase. | 0.909 |
ahcY_1 | mdeA_2 | BVIR_3109 | BVIR_1581 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | Methionine gamma-lyase. | 0.909 |
ahcY_1 | mdeA_3 | BVIR_3109 | BVIR_2211 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | Methionine gamma-lyase. | 0.909 |
ahcY_1 | metC_2 | BVIR_3109 | BVIR_1527 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | Cystathionine beta-lyase MetC. | 0.918 |
ahcY_1 | metE_1 | BVIR_3109 | BVIR_2112 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.985 |
ahcY_1 | metH | BVIR_3109 | BVIR_386 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.956 |
ahcY_1 | metZ | BVIR_3109 | BVIR_2513 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.918 |
cbs_1 | ahcY_1 | BVIR_363 | BVIR_3109 | Putative cystathionine beta-synthase. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.938 |
cbs_1 | mdeA_1 | BVIR_363 | BVIR_492 | Putative cystathionine beta-synthase. | Methionine gamma-lyase. | 0.932 |
cbs_1 | mdeA_2 | BVIR_363 | BVIR_1581 | Putative cystathionine beta-synthase. | Methionine gamma-lyase. | 0.932 |
cbs_1 | mdeA_3 | BVIR_363 | BVIR_2211 | Putative cystathionine beta-synthase. | Methionine gamma-lyase. | 0.933 |
cbs_1 | metC_2 | BVIR_363 | BVIR_1527 | Putative cystathionine beta-synthase. | Cystathionine beta-lyase MetC. | 0.989 |
cbs_1 | metE_1 | BVIR_363 | BVIR_2112 | Putative cystathionine beta-synthase. | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.948 |
cbs_1 | metH | BVIR_363 | BVIR_386 | Putative cystathionine beta-synthase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.951 |
cbs_1 | metX | BVIR_363 | BVIR_158 | Putative cystathionine beta-synthase. | Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. | 0.840 |
cbs_1 | metZ | BVIR_363 | BVIR_2513 | Putative cystathionine beta-synthase. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.990 |
mdeA_1 | ahcY_1 | BVIR_492 | BVIR_3109 | Methionine gamma-lyase. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.909 |
mdeA_1 | cbs_1 | BVIR_492 | BVIR_363 | Methionine gamma-lyase. | Putative cystathionine beta-synthase. | 0.932 |
mdeA_1 | mdeA_2 | BVIR_492 | BVIR_1581 | Methionine gamma-lyase. | Methionine gamma-lyase. | 0.901 |
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