BVIR_516 protein (Blastochloris viridis) - STRING interaction network

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BVIR_516

RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (511 aa)

Predicted Functional Partners:

rpoA

0.902

rpoB_1

0.897

rpoZ

0.885

rpoC

0.869

nifA_1

0.849

nifA_2

0.849

ptsN

0.802

acoR

0.799

glnG_2

0.795

ntrC_1

0.794

Your Current Organism:

Blastochloris viridis

NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BVIR_516	acoR	BVIR_516	BVIR_1128	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Acetoin catabolism regulatory protein.	0.799
BVIR_516	glnG_2	BVIR_516	BVIR_2592	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Nitrogen regulation protein NR(I).	0.795
BVIR_516	nifA_1	BVIR_516	BVIR_2290	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Nif-specific regulatory protein.	0.849
BVIR_516	nifA_2	BVIR_516	BVIR_2892	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Nitrogen fixation protein VnfA.	0.849
BVIR_516	ntrC_1	BVIR_516	BVIR_1918	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Nitrogen assimilation regulatory protein; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.	0.794
BVIR_516	ptsN	BVIR_516	BVIR_514	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Nitrogen regulatory protein.	0.802
BVIR_516	rpoA	BVIR_516	BVIR_1398	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.902
BVIR_516	rpoB_1	BVIR_516	BVIR_1366	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.897
BVIR_516	rpoC	BVIR_516	BVIR_1367	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.869
BVIR_516	rpoZ	BVIR_516	BVIR_807	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.885
acoR	BVIR_516	BVIR_1128	BVIR_516	Acetoin catabolism regulatory protein.	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.799
glnG_2	BVIR_516	BVIR_2592	BVIR_516	Nitrogen regulation protein NR(I).	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.795
nifA_1	BVIR_516	BVIR_2290	BVIR_516	Nif-specific regulatory protein.	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.849
nifA_1	nifA_2	BVIR_2290	BVIR_2892	Nif-specific regulatory protein.	Nitrogen fixation protein VnfA.	0.915
nifA_2	BVIR_516	BVIR_2892	BVIR_516	Nitrogen fixation protein VnfA.	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.849
nifA_2	nifA_1	BVIR_2892	BVIR_2290	Nitrogen fixation protein VnfA.	Nif-specific regulatory protein.	0.915
ntrC_1	BVIR_516	BVIR_1918	BVIR_516	Nitrogen assimilation regulatory protein; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.794
ptsN	BVIR_516	BVIR_514	BVIR_516	Nitrogen regulatory protein.	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.802
rpoA	BVIR_516	BVIR_1398	BVIR_516	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.902
rpoA	rpoB_1	BVIR_1398	BVIR_1366	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998

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