Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
puuB_1Gamma-glutamylputrescine oxidoreductase. (450 aa)    
Predicted Functional Partners:
puuA_1
Gamma-glutamylputrescine synthetase PuuA; Belongs to the glutamine synthetase family.
 
  
 0.767
BVIR_2027
Hydrogen cyanide synthase subunit HcnB.
 
 
 
 0.701
puuB_3
4-methylaminobutanoate oxidase (formaldehyde-forming).
 
   
 0.579
speB
Agmatinase; Belongs to the arginase family.
 
  
 0.574
thiO
D-amino acid dehydrogenase small subunit.
 
   
 0.537
gcvT
Aminomethyltransferase.
  
 
 0.497
dgdA
2,2-dialkylglycine decarboxylase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.497
BVIR_2028
Hydrogen cyanide synthase subunit HcnA.
 
    0.460
BVIR_2715
Omega-amino acid--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.444
fccB
Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor.
   
 
 0.430
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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