STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yiaO_12,3-diketo-L-gulonate-binding periplasmic protein YiaO precursor. (341 aa)    
Predicted Functional Partners:
siaT_3
Sialic acid TRAP transporter permease protein SiaT.
  
 0.911
siaT_2
Sialic acid TRAP transporter permease protein SiaT.
 
  
 0.909
siaT_5
Sialic acid TRAP transporter permease protein SiaT.
  
 0.855
siaT_1
Sialic acid TRAP transporter permease protein SiaT.
  
 0.853
BVIR_488
2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.
 
  
 0.749
BVIR_1150
Tripartite ATP-independent periplasmic transporters, DctQ component.
 
  
 0.692
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.