Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BVIR_2305 | mltB_1 | BVIR_2305 | BVIR_532 | RlpA-like protein precursor; Belongs to the RlpA family. | Membrane-bound lytic murein transglycosylase B precursor. | 0.500 |
| amiD | mltB_1 | BVIR_394 | BVIR_532 | N-acetylmuramoyl-L-alanine amidase AmiD precursor. | Membrane-bound lytic murein transglycosylase B precursor. | 0.436 |
| amiD | murE_1 | BVIR_394 | BVIR_400 | N-acetylmuramoyl-L-alanine amidase AmiD precursor. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.427 |
| amiD | penA | BVIR_394 | BVIR_399 | N-acetylmuramoyl-L-alanine amidase AmiD precursor. | Peptidoglycan synthase FtsI. | 0.534 |
| dacA_1 | mltB_1 | BVIR_1630 | BVIR_532 | D-alanyl-D-alanine carboxypeptidase DacA precursor; Belongs to the peptidase S11 family. | Membrane-bound lytic murein transglycosylase B precursor. | 0.427 |
| dacA_1 | penA | BVIR_1630 | BVIR_399 | D-alanyl-D-alanine carboxypeptidase DacA precursor; Belongs to the peptidase S11 family. | Peptidoglycan synthase FtsI. | 0.465 |
| dacA_1 | rlpA | BVIR_1630 | BVIR_1629 | D-alanyl-D-alanine carboxypeptidase DacA precursor; Belongs to the peptidase S11 family. | RlpA-like protein precursor; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.624 |
| mltB_1 | BVIR_2305 | BVIR_532 | BVIR_2305 | Membrane-bound lytic murein transglycosylase B precursor. | RlpA-like protein precursor; Belongs to the RlpA family. | 0.500 |
| mltB_1 | amiD | BVIR_532 | BVIR_394 | Membrane-bound lytic murein transglycosylase B precursor. | N-acetylmuramoyl-L-alanine amidase AmiD precursor. | 0.436 |
| mltB_1 | dacA_1 | BVIR_532 | BVIR_1630 | Membrane-bound lytic murein transglycosylase B precursor. | D-alanyl-D-alanine carboxypeptidase DacA precursor; Belongs to the peptidase S11 family. | 0.427 |
| mltB_1 | murE_1 | BVIR_532 | BVIR_400 | Membrane-bound lytic murein transglycosylase B precursor. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.414 |
| mltB_1 | penA | BVIR_532 | BVIR_399 | Membrane-bound lytic murein transglycosylase B precursor. | Peptidoglycan synthase FtsI. | 0.561 |
| mltB_1 | rlpA | BVIR_532 | BVIR_1629 | Membrane-bound lytic murein transglycosylase B precursor. | RlpA-like protein precursor; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.500 |
| murE_1 | amiD | BVIR_400 | BVIR_394 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | N-acetylmuramoyl-L-alanine amidase AmiD precursor. | 0.427 |
| murE_1 | mltB_1 | BVIR_400 | BVIR_532 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | Membrane-bound lytic murein transglycosylase B precursor. | 0.414 |
| murE_1 | penA | BVIR_400 | BVIR_399 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | Peptidoglycan synthase FtsI. | 0.991 |
| penA | amiD | BVIR_399 | BVIR_394 | Peptidoglycan synthase FtsI. | N-acetylmuramoyl-L-alanine amidase AmiD precursor. | 0.534 |
| penA | dacA_1 | BVIR_399 | BVIR_1630 | Peptidoglycan synthase FtsI. | D-alanyl-D-alanine carboxypeptidase DacA precursor; Belongs to the peptidase S11 family. | 0.465 |
| penA | mltB_1 | BVIR_399 | BVIR_532 | Peptidoglycan synthase FtsI. | Membrane-bound lytic murein transglycosylase B precursor. | 0.561 |
| penA | murE_1 | BVIR_399 | BVIR_400 | Peptidoglycan synthase FtsI. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.991 |
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