Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fixJ_3Response regulator protein TmoT. (211 aa)    
Predicted Functional Partners:
fixL_2
Sensor protein FixL.
 0.991
BVIR_1662
Blue-light-activated histidine kinase.
  
 
 0.946
fixL_1
Sensor protein FixL.
 
 
 0.777
kdpE
KDP operon transcriptional regulatory protein KdpE.
  
   
 0.685
mprA_1
Response regulator MprA.
  
   
 0.674
aadR_1
Nitrogen fixation regulation protein FixK.
 
   
 0.641
fixJ_2
Response regulator protein TodT.
 
    
0.567
BVIR_751
Hypothetical protein.
  
     0.564
cheA_1
Chemotaxis protein CheA.
   
 
 0.544
cheY_4
Chemotaxis protein CheY.
  
   
 0.540
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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