Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
bioNEnergy-coupling factor transporter transmembrane protein BioN. (204 aa)    
Predicted Functional Partners:
bioM
Biotin transport ATP-binding protein BioM.
 
 0.998
bioY
Biotin transporter BioY.
 
 0.996
bioY2
Biotin transporter BioY.
  
 0.955
cbiO
Cobalt import ATP-binding protein CbiO.
 
 
 0.906
gsiA_2
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
  
 
 0.881
nikMN
Fused nickel transport protein NikMN.
  
  
 0.711
cobL
Precorrin-6Y C(5,15)-methyltransferase [decarboxylating].
  
  
 0.620
cysG_2
Siroheme synthase.
     
 0.542
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.483
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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