Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cbbL | cbbX | BVIR_587 | BVIR_585 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | Stage V sporulation protein K. | 0.907 |
| cbbL | cbxSC | BVIR_587 | BVIR_586 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | Ribulose bisphosphate carboxylase small chain, chromosomal. | 0.999 |
| cbbL | cmpR_1 | BVIR_587 | BVIR_588 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | HTH-type transcriptional activator CmpR; Belongs to the LysR transcriptional regulatory family. | 0.821 |
| cbbL | fbp | BVIR_587 | BVIR_584 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | Fructose-1,6-bisphosphatase class 1; Belongs to the FBPase class 1 family. | 0.683 |
| cbbL | fda | BVIR_587 | BVIR_581 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.492 |
| cbbL | prkA | BVIR_587 | BVIR_583 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | Phosphoribulokinase 1. | 0.846 |
| cbbL | rlp2 | BVIR_587 | BVIR_1439 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | Ribulose bisphosphate carboxylase-like protein 2; Belongs to the RuBisCO large chain family. | 0.926 |
| cbbL | tktA | BVIR_587 | BVIR_582 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | Transketolase 1; Belongs to the transketolase family. | 0.420 |
| cbbX | cbbL | BVIR_585 | BVIR_587 | Stage V sporulation protein K. | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | 0.907 |
| cbbX | cbxSC | BVIR_585 | BVIR_586 | Stage V sporulation protein K. | Ribulose bisphosphate carboxylase small chain, chromosomal. | 0.939 |
| cbbX | cmpR_1 | BVIR_585 | BVIR_588 | Stage V sporulation protein K. | HTH-type transcriptional activator CmpR; Belongs to the LysR transcriptional regulatory family. | 0.536 |
| cbbX | fbp | BVIR_585 | BVIR_584 | Stage V sporulation protein K. | Fructose-1,6-bisphosphatase class 1; Belongs to the FBPase class 1 family. | 0.768 |
| cbbX | fda | BVIR_585 | BVIR_581 | Stage V sporulation protein K. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.430 |
| cbbX | prkA | BVIR_585 | BVIR_583 | Stage V sporulation protein K. | Phosphoribulokinase 1. | 0.886 |
| cbbX | rpe_1 | BVIR_585 | BVIR_580 | Stage V sporulation protein K. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.430 |
| cbbX | tktA | BVIR_585 | BVIR_582 | Stage V sporulation protein K. | Transketolase 1; Belongs to the transketolase family. | 0.717 |
| cbxSC | cbbL | BVIR_586 | BVIR_587 | Ribulose bisphosphate carboxylase small chain, chromosomal. | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | 0.999 |
| cbxSC | cbbX | BVIR_586 | BVIR_585 | Ribulose bisphosphate carboxylase small chain, chromosomal. | Stage V sporulation protein K. | 0.939 |
| cbxSC | cmpR_1 | BVIR_586 | BVIR_588 | Ribulose bisphosphate carboxylase small chain, chromosomal. | HTH-type transcriptional activator CmpR; Belongs to the LysR transcriptional regulatory family. | 0.804 |
| cbxSC | fbp | BVIR_586 | BVIR_584 | Ribulose bisphosphate carboxylase small chain, chromosomal. | Fructose-1,6-bisphosphatase class 1; Belongs to the FBPase class 1 family. | 0.721 |
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