Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cbbL | cbbX | BVIR_587 | BVIR_585 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | Stage V sporulation protein K. | 0.907 |
| cbbL | cbxSC | BVIR_587 | BVIR_586 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | Ribulose bisphosphate carboxylase small chain, chromosomal. | 0.999 |
| cbbL | cmpR_1 | BVIR_587 | BVIR_588 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | HTH-type transcriptional activator CmpR; Belongs to the LysR transcriptional regulatory family. | 0.821 |
| cbbL | gph_2 | BVIR_587 | BVIR_793 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | Phosphoglycolate phosphatase, chromosomal; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.913 |
| cbbL | gph_4 | BVIR_587 | BVIR_1899 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | Phosphoglycolate phosphatase. | 0.903 |
| cbbL | ppaX | BVIR_587 | BVIR_1405 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | Pyrophosphatase PpaX. | 0.903 |
| cbbL | prkA | BVIR_587 | BVIR_583 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | Phosphoribulokinase 1. | 0.846 |
| cbbL | rlp2 | BVIR_587 | BVIR_1439 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | Ribulose bisphosphate carboxylase-like protein 2; Belongs to the RuBisCO large chain family. | 0.926 |
| cbbL | yrdA_1 | BVIR_587 | BVIR_1611 | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. | 0.733 |
| cbbX | cbbL | BVIR_585 | BVIR_587 | Stage V sporulation protein K. | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | 0.907 |
| cbbX | cbxSC | BVIR_585 | BVIR_586 | Stage V sporulation protein K. | Ribulose bisphosphate carboxylase small chain, chromosomal. | 0.939 |
| cbbX | cmpR_1 | BVIR_585 | BVIR_588 | Stage V sporulation protein K. | HTH-type transcriptional activator CmpR; Belongs to the LysR transcriptional regulatory family. | 0.536 |
| cbbX | prkA | BVIR_585 | BVIR_583 | Stage V sporulation protein K. | Phosphoribulokinase 1. | 0.886 |
| cbxSC | cbbL | BVIR_586 | BVIR_587 | Ribulose bisphosphate carboxylase small chain, chromosomal. | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | 0.999 |
| cbxSC | cbbX | BVIR_586 | BVIR_585 | Ribulose bisphosphate carboxylase small chain, chromosomal. | Stage V sporulation protein K. | 0.939 |
| cbxSC | cmpR_1 | BVIR_586 | BVIR_588 | Ribulose bisphosphate carboxylase small chain, chromosomal. | HTH-type transcriptional activator CmpR; Belongs to the LysR transcriptional regulatory family. | 0.804 |
| cbxSC | cynT | BVIR_586 | BVIR_3301 | Ribulose bisphosphate carboxylase small chain, chromosomal. | Carbonic anhydrase 1; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | 0.855 |
| cbxSC | gph_2 | BVIR_586 | BVIR_793 | Ribulose bisphosphate carboxylase small chain, chromosomal. | Phosphoglycolate phosphatase, chromosomal; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.924 |
| cbxSC | gph_4 | BVIR_586 | BVIR_1899 | Ribulose bisphosphate carboxylase small chain, chromosomal. | Phosphoglycolate phosphatase. | 0.908 |
| cbxSC | ppaX | BVIR_586 | BVIR_1405 | Ribulose bisphosphate carboxylase small chain, chromosomal. | Pyrophosphatase PpaX. | 0.908 |
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