STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_59Murein hydrolase activator EnvC precursor. (426 aa)    
Predicted Functional Partners:
ctpB
Carboxy-terminal processing protease CtpB precursor; Belongs to the peptidase S41A family.
 
  
 0.937
BVIR_166
Cell division ABC transporter subunit FtsX.
 
 
 
 0.934
amiC_1
N-acetylmuramoyl-L-alanine amidase AmiC precursor.
 
 
 
 0.893
ftsE
Cell division ATP-binding protein FtsE.
 
 
 
 0.893
BVIR_1106
TPR repeat-containing protein YfgC precursor.
 
 
   0.826
BVIR_428
Hypothetical protein.
   
 
 0.701
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
    0.670
BVIR_3081
Hypothetical protein.
  
     0.657
BVIR_57
Divergent polysaccharide deacetylase.
 
     0.649
BVIR_3019
Hypothetical protein.
  
     0.633
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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