STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crtM15-cis-phytoene synthase. (379 aa)    
Predicted Functional Partners:
crtN_1
Phytoene desaturase (neurosporene-forming).
 
 0.998
crtN_2
Phytoene desaturase (neurosporene-forming).
 
 0.994
BVIR_564
Putative oxidoreductase.
 
 
 0.965
BVIR_597
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 0.953
BVIR_1565
All-trans-phytoene synthase.
 
  
  0.943
crtP
Hydroxyneurosporene desaturase.
  
 0.918
BVIR_188
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.893
ispB
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.891
uppS
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific); Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
 0.822
hoxF
NAD-reducing hydrogenase HoxS subunit alpha.
     
 0.819
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.