Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pufBLight-harvesting protein B-1015 beta chain precursor; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (69 aa)    
Predicted Functional Partners:
pufA
Light-harvesting protein B-1015 alpha chain precursor; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
 
 0.999
pufL
Reaction center protein L chain; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
 
 0.999
pufM
Reaction center protein M chain; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
 
 0.999
pufC
Photosynthetic reaction center cytochrome c subunit precursor; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.
 
 
 0.999
puhA
Reaction center protein H chain; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
  
 
 0.998
BVIR_601
Light-independent protochlorophyllide reductase subunit B.
 
   
 0.922
BVIR_1786
Light-harvesting protein B-1015 gamma chain; One of the components of the bacteriochlorophyll-protein complex in the chromatophore membrane.
    
   0.900
BVIR_1787
Light-harvesting protein B-1015 gamma chain.
    
   0.900
BVIR_1788
Light-harvesting protein B-1015 gamma chain.
    
   0.900
bchY
Light-independent protochlorophyllide reductase subunit N.
 
    0.887
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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