Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
polC_1DNA polymerase III PolC-type. (697 aa)    
Predicted Functional Partners:
actP_1
Cation/acetate symporter ActP; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.865
polC_3
DNA polymerase III PolC-type.
 
  
 0.842
BVIR_634
Hypothetical protein.
 
     0.824
polC_2
DNA polymerase III PolC-type.
 
  
0.694
actP_3
Cation/acetate symporter ActP; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.674
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.
  
 
 0.639
yjcH
Inner membrane protein YjcH.
 
  
 0.634
gltB_1
Ferredoxin-dependent glutamate synthase 1.
     
 0.592
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.588
pleC_1
Non-motile and phage-resistance protein.
 
   
 0.588
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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