Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BVIR_1290 | rfbC | BVIR_1290 | BVIR_642 | MviN-like protein. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.838 |
| BVIR_1290 | tuaD_2 | BVIR_1290 | BVIR_2751 | MviN-like protein. | UDP-glucose 6-dehydrogenase TuaD. | 0.827 |
| BVIR_3145 | rfbC | BVIR_3145 | BVIR_642 | Colanic acid exporter. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.837 |
| BVIR_3145 | tuaD_2 | BVIR_3145 | BVIR_2751 | Colanic acid exporter. | UDP-glucose 6-dehydrogenase TuaD. | 0.848 |
| BVIR_643 | BVIR_645 | BVIR_643 | BVIR_645 | NAD dependent epimerase/dehydratase family protein. | tRNA (mo5U34)-methyltransferase. | 0.775 |
| BVIR_643 | galE_1 | BVIR_643 | BVIR_641 | NAD dependent epimerase/dehydratase family protein. | UDP-glucose 4-epimerase. | 0.864 |
| BVIR_643 | proA_1 | BVIR_643 | BVIR_644 | NAD dependent epimerase/dehydratase family protein. | 4-hydroxy-4-methyl-2-oxoglutarate aldolase. | 0.788 |
| BVIR_643 | rfbC | BVIR_643 | BVIR_642 | NAD dependent epimerase/dehydratase family protein. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.882 |
| BVIR_643 | rfbF | BVIR_643 | BVIR_640 | NAD dependent epimerase/dehydratase family protein. | Glucose-1-phosphate cytidylyltransferase. | 0.857 |
| BVIR_645 | BVIR_643 | BVIR_645 | BVIR_643 | tRNA (mo5U34)-methyltransferase. | NAD dependent epimerase/dehydratase family protein. | 0.775 |
| BVIR_645 | galE_1 | BVIR_645 | BVIR_641 | tRNA (mo5U34)-methyltransferase. | UDP-glucose 4-epimerase. | 0.775 |
| BVIR_645 | proA_1 | BVIR_645 | BVIR_644 | tRNA (mo5U34)-methyltransferase. | 4-hydroxy-4-methyl-2-oxoglutarate aldolase. | 0.782 |
| BVIR_645 | rfbC | BVIR_645 | BVIR_642 | tRNA (mo5U34)-methyltransferase. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.793 |
| BVIR_645 | rfbF | BVIR_645 | BVIR_640 | tRNA (mo5U34)-methyltransferase. | Glucose-1-phosphate cytidylyltransferase. | 0.738 |
| algA_1 | algA_2 | BVIR_2597 | BVIR_2731 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.920 |
| algA_1 | rfbC | BVIR_2597 | BVIR_642 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.784 |
| algA_1 | rfbF | BVIR_2597 | BVIR_640 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Glucose-1-phosphate cytidylyltransferase. | 0.597 |
| algA_1 | tuaD_2 | BVIR_2597 | BVIR_2751 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | UDP-glucose 6-dehydrogenase TuaD. | 0.634 |
| algA_2 | algA_1 | BVIR_2731 | BVIR_2597 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.920 |
| algA_2 | rfbC | BVIR_2731 | BVIR_642 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.784 |
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