Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BVIR_115 | BVIR_133 | BVIR_115 | BVIR_133 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.476 |
| BVIR_115 | BVIR_1548 | BVIR_115 | BVIR_1548 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Rare lipoprotein A. | 0.447 |
| BVIR_115 | BVIR_1929 | BVIR_115 | BVIR_1929 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Septum formation initiator. | 0.506 |
| BVIR_115 | BVIR_3194 | BVIR_115 | BVIR_3194 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | PD-(D/E)XK nuclease superfamily protein. | 0.799 |
| BVIR_115 | BVIR_659 | BVIR_115 | BVIR_659 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein. | 0.551 |
| BVIR_115 | lptD_1 | BVIR_115 | BVIR_682 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | LPS-assembly protein LptD precursor; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.784 |
| BVIR_133 | BVIR_115 | BVIR_133 | BVIR_115 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.476 |
| BVIR_133 | BVIR_1548 | BVIR_133 | BVIR_1548 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Rare lipoprotein A. | 0.578 |
| BVIR_133 | BVIR_3194 | BVIR_133 | BVIR_3194 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | PD-(D/E)XK nuclease superfamily protein. | 0.703 |
| BVIR_133 | BVIR_659 | BVIR_133 | BVIR_659 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Hypothetical protein. | 0.602 |
| BVIR_1471 | BVIR_1929 | BVIR_1471 | BVIR_1929 | Hypothetical protein. | Septum formation initiator. | 0.583 |
| BVIR_1471 | BVIR_659 | BVIR_1471 | BVIR_659 | Hypothetical protein. | Hypothetical protein. | 0.539 |
| BVIR_1471 | lptD_1 | BVIR_1471 | BVIR_682 | Hypothetical protein. | LPS-assembly protein LptD precursor; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.640 |
| BVIR_1548 | BVIR_115 | BVIR_1548 | BVIR_115 | Rare lipoprotein A. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.447 |
| BVIR_1548 | BVIR_133 | BVIR_1548 | BVIR_133 | Rare lipoprotein A. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.578 |
| BVIR_1548 | BVIR_1929 | BVIR_1548 | BVIR_1929 | Rare lipoprotein A. | Septum formation initiator. | 0.600 |
| BVIR_1548 | BVIR_659 | BVIR_1548 | BVIR_659 | Rare lipoprotein A. | Hypothetical protein. | 0.574 |
| BVIR_1548 | lptD_1 | BVIR_1548 | BVIR_682 | Rare lipoprotein A. | LPS-assembly protein LptD precursor; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.699 |
| BVIR_1929 | BVIR_115 | BVIR_1929 | BVIR_115 | Septum formation initiator. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.506 |
| BVIR_1929 | BVIR_1471 | BVIR_1929 | BVIR_1471 | Septum formation initiator. | Hypothetical protein. | 0.583 |
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