Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
paaK_3Phenylacetate-coenzyme A ligase. (413 aa)    
Predicted Functional Partners:
livF_2
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
 
    0.869
BVIR_710
Hypothetical protein.
 
    0.852
BVIR_709
Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.
 
    0.822
BVIR_706
Long-chain-fatty-acid--CoA ligase FadD15.
 
    0.815
ecfA1
Energy-coupling factor transporter ATP-binding protein EcfA3.
 
    0.789
livH_3
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
    0.781
BVIR_704
Indolepyruvate ferredoxin oxidoreductase.
 
    0.576
bclA
Acetyl-coenzyme A synthetase.
  
     0.480
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
       0.477
BVIR_3256
Hypothetical protein.
 
    0.474
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.