Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hssHomospermidine synthase; Involved in the NAD(+)-dependent synthesis of the polyamine homospermidine from putrescine. (477 aa)    
Predicted Functional Partners:
ldc_1
Lysine/ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
     0.789
BVIR_715
Hypothetical protein.
       0.553
rluA
Ribosomal large subunit pseudouridine synthase A.
  
     0.530
mltA
Membrane-bound lytic murein transglycosylase A precursor.
  
   
 0.417
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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