Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BVIR_760Glycosyl transferase family 2. (263 aa)    
Predicted Functional Partners:
ydaD
General stress protein 39.
   
   0.791
sunS
SPBc2 prophage-derived glycosyltransferase SunS.
  
     0.761
arnT
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase.
 
  
 0.641
wcaJ
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.587
BVIR_922
Hypothetical protein.
 
  
 0.491
BVIR_443
Hypothetical protein.
 
     0.490
arnC
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase.
 
   
 0.466
BVIR_1087
Ceramidase.
 
     0.413
BVIR_1296
Polysaccharide biosynthesis/export protein.
 
  
 0.406
cotSA_2
Spore coat protein SA.
  
 0.402
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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