STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_770Tetratricopeptide repeat protein. (210 aa)    
Predicted Functional Partners:
BVIR_2497
Hypothetical protein.
  
     0.694
BVIR_171
Hypothetical protein.
  
     0.691
polA_1
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.670
BVIR_2498
Hypothetical protein.
  
     0.654
BVIR_540
Hypothetical protein.
  
     0.653
BVIR_2496
Hypothetical protein.
 
     0.552
BVIR_3221
Deoxycytidine triphosphate deaminase.
  
     0.501
BVIR_3192
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE.
 
     0.494
rpmJ
50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
       0.480
hisS_2
Histidine--tRNA ligase.
 
     0.479
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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