Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_778Hypothetical protein. (108 aa)    
Predicted Functional Partners:
BVIR_891
Hypothetical protein.
  
 
 0.761
BVIR_468
Chromosome partition protein Smc.
  
     0.623
BVIR_2381
Hypothetical protein.
  
     0.524
acpXL
Acyl carrier protein AcpXL.
  
     0.480
BVIR_1678
4-hydroxybenzoyl-CoA thioesterase.
  
     0.457
fabF_4
3-oxoacyl-[acyl-carrier-protein] synthase 2; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
     0.445
BVIR_766
Hypothetical protein.
  
     0.431
BVIR_777
Hypothetical protein.
       0.421
BVIR_2506
Hypothetical protein.
  
     0.411
BVIR_976
OmpA-like transmembrane domain protein.
  
     0.403
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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