STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_782Hypothetical protein. (821 aa)    
Predicted Functional Partners:
nrfB
Cytochrome c-type protein NrfB precursor.
 
   0.933
mcp4_6
Methyl-accepting chemotaxis protein 4.
  
     0.668
BVIR_3162
Hypothetical protein.
  
     0.619
iro
Iron oxidase precursor; Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria; Belongs to the high-potential iron-sulfur protein (HiPIP) family.
       0.585
ureR_1
HTH-type transcriptional regulator VirS.
  
     0.579
cowN
N(2)-fixation sustaining protein CowN; Is required to sustain N(2)-dependent growth in the presence of low levels of carbon monoxide (CO). Probably acts by protecting the N(2) fixation ability of the nitrogenase complex, which is inactivated in the presence of CO.
  
     0.545
BVIR_2897
Iron only nitrogenase protein AnfO (AnfO_nitrog).
  
     0.536
BVIR_2145
Hypothetical protein.
  
     0.510
BVIR_2624
SCP-2 sterol transfer family protein.
  
     0.507
yjjB
Hypothetical protein.
  
     0.502
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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