STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
echA8_12,3-dehydroadipyl-CoA hydratase. (342 aa)    
Predicted Functional Partners:
Hgd
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
 
 0.989
fadB2_1
3-hydroxybutyryl-CoA dehydrogenase.
 0.949
fadB2_2
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 0.944
BVIR_1423
Acyl-CoA dehydrogenase.
  
 0.942
aidB_1
Acyl-CoA dehydrogenase.
  
 0.942
BVIR_2124
Acyl-CoA dehydrogenase.
  
 0.942
BVIR_370
Acyl-CoA dehydrogenase.
  
 0.942
BVIR_1435
Methylmalonyl-CoA carboxyltransferase 12S subunit.
 
 0.934
BVIR_1112
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
 0.930
phaJ_1
(R)-specific enoyl-CoA hydratase.
  
 0.930
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.