STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_829Hypothetical protein. (159 aa)    
Predicted Functional Partners:
BVIR_1407
Calerythrin.
    
 0.955
BVIR_2214
EF hand.
    
 0.955
BVIR_1238
Hypothetical protein.
   
 0.818
BVIR_1695
RNA polymerase-associated protein RapA.
  
 
 
 0.727
rapA
RNA polymerase-associated protein RapA.
  
 
 
 0.725
BVIR_830
Acyl-CoA dehydrogenase.
   
   0.720
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
   0.679
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
   0.663
echA8_1
2,3-dehydroadipyl-CoA hydratase.
   
   0.626
BVIR_1894
WD domain, G-beta repeat.
   
 0.612
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.