STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
yibHPutative multidrug resistance protein EmrK. (399 aa)    
Predicted Functional Partners:
emrB_2
Multidrug export protein EmrB; Belongs to the major facilitator superfamily.
 
 0.988
ttgC_1
Toluene efflux pump outer membrane protein TtgI precursor.
 
 
 0.786
cusC
Toluene efflux pump outer membrane protein TtgI precursor.
 
 
 0.784
bepC_1
Outer membrane efflux protein BepC precursor; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
  
 
 0.771
bepC_2
Outer membrane efflux protein BepC precursor.
  
 
 0.728
macB_1
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
  
 0.714
macB_2
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
  
 0.714
hsrA
Putative transport protein HsrA; Belongs to the major facilitator superfamily.
 
 
 0.702
bmr3_1
Multidrug resistance protein 3; Belongs to the major facilitator superfamily.
 
 0.683
yvdT_2
Putative HTH-type transcriptional regulator YvdT.
 
   
 0.588
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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