Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_874Hypothetical protein. (228 aa)    
Predicted Functional Partners:
BVIR_30
Bacterial transcription activator, effector binding domain.
  
   
 0.678
BVIR_2388
Hypothetical protein.
 
     0.624
BVIR_1257
Hypothetical protein.
  
     0.553
yjaB_1
Putative N-acetyltransferase YjaB.
  
     0.544
aldHT_1
Aldehyde dehydrogenase, thermostable.
       0.530
BVIR_2390
Hypothetical protein.
  
     0.510
BVIR_2652
Acetyltransferase Pat.
  
     0.504
BVIR_681
Chaperone SurA.
  
    0.493
BVIR_3075
Hypothetical protein.
  
     0.483
BVIR_3207
Hypothetical protein.
 
     0.480
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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