sigA protein (Blastochloris viridis) - STRING interaction network

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sigA

RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (685 aa)

Predicted Functional Partners:

dnaG

0.981

rpoA

0.971

rpoB_1

0.969

rpoZ

0.939

rpoC

0.936

nusA

0.882

BVIR_3307

0.869

BVIR_3199

0.846

BVIR_41

0.815

BVIR_1192

0.763

Your Current Organism:

Blastochloris viridis

NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BVIR_1192	rpoA	BVIR_1192	BVIR_1398	Hypothetical protein.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.843
BVIR_1192	rpoB_1	BVIR_1192	BVIR_1366	Hypothetical protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.862
BVIR_1192	rpoC	BVIR_1192	BVIR_1367	Hypothetical protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.848
BVIR_1192	rpoZ	BVIR_1192	BVIR_807	Hypothetical protein.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.825
BVIR_1192	sigA	BVIR_1192	BVIR_889	Hypothetical protein.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.763
BVIR_3199	rpoA	BVIR_3199	BVIR_1398	GcrA cell cycle regulator.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.658
BVIR_3199	rpoB_1	BVIR_3199	BVIR_1366	GcrA cell cycle regulator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.803
BVIR_3199	rpoC	BVIR_3199	BVIR_1367	GcrA cell cycle regulator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.803
BVIR_3199	rpoZ	BVIR_3199	BVIR_807	GcrA cell cycle regulator.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.704
BVIR_3199	sigA	BVIR_3199	BVIR_889	GcrA cell cycle regulator.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.846
BVIR_3307	rpoA	BVIR_3307	BVIR_1398	DNA-binding transcriptional dual regulator Crp.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.864
BVIR_3307	rpoB_1	BVIR_3307	BVIR_1366	DNA-binding transcriptional dual regulator Crp.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.823
BVIR_3307	rpoC	BVIR_3307	BVIR_1367	DNA-binding transcriptional dual regulator Crp.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.823
BVIR_3307	rpoZ	BVIR_3307	BVIR_807	DNA-binding transcriptional dual regulator Crp.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.814
BVIR_3307	sigA	BVIR_3307	BVIR_889	DNA-binding transcriptional dual regulator Crp.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.869
BVIR_41	rpoA	BVIR_41	BVIR_1398	RNA polymerase-binding transcription factor CarD.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.890
BVIR_41	rpoB_1	BVIR_41	BVIR_1366	RNA polymerase-binding transcription factor CarD.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.870
BVIR_41	rpoC	BVIR_41	BVIR_1367	RNA polymerase-binding transcription factor CarD.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.873
BVIR_41	rpoZ	BVIR_41	BVIR_807	RNA polymerase-binding transcription factor CarD.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.908
BVIR_41	sigA	BVIR_41	BVIR_889	RNA polymerase-binding transcription factor CarD.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.815

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