STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scpA_2Methylmalonyl-CoA mutase. (657 aa)    
Predicted Functional Partners:
BVIR_1998
Putative GTPase.
  
 0.997
BVIR_2634
Putative GTPase.
  
 0.996
mutB
Methylmalonyl-CoA mutase large subunit.
 
 
0.986
BVIR_1336
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
  
 0.984
BVIR_182
Acyl-CoA dehydrogenase.
 
 
 0.970
BVIR_87
Crotonyl-CoA reductase.
   
 0.888
mutA
Methylmalonyl-CoA mutase small subunit.
 
 
0.840
mcl1
Malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
  
 0.776
BVIR_2665
Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase.
 
  
 0.770
scpC
Succinyl-CoA:coenzyme A transferase.
  
  
 0.741
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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