Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_95Hypothetical protein. (338 aa)    
Predicted Functional Partners:
cobT
Aerobic cobaltochelatase subunit CobT.
       0.828
cobS-2
Aerobic cobaltochelatase subunit CobS.
       0.786
BVIR_3066
Putative transmembrane protein (Alph_Pro_TM).
  
     0.646
BVIR_185
Hypothetical protein.
  
     0.615
BVIR_963
Hypothetical protein.
  
     0.599
BVIR_610
Universal stress protein family protein.
  
     0.576
BVIR_92
Chaperone protein DnaJ.
       0.568
BVIR_1290
MviN-like protein.
  
     0.561
BVIR_2195
RDD family protein.
  
     0.527
BVIR_1293
Hypothetical protein.
  
     0.526
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.