STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_958Putative ABC transporter ATP-binding protein. (262 aa)    
Predicted Functional Partners:
mlaE
Putative phospholipid ABC transporter permease protein MlaE.
 
 0.999
BVIR_959
Mce related protein.
 0.999
BVIR_501
Hypothetical protein.
   
   0.927
BVIR_960
Hypothetical protein.
 
    0.914
ybhS
Inner membrane transport permease YbhS.
      0.817
yejE
Inner membrane ABC transporter permease protein YejE.
      0.810
bioM
Biotin transport ATP-binding protein BioM.
 
    
0.636
modB_1
Molybdenum transport system permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
    0.631
ycjG
L-Ala-D/L-Glu epimerase.
      0.610
BVIR_956
Hypothetical protein.
       0.562
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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