STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_960Hypothetical protein. (201 aa)    
Predicted Functional Partners:
BVIR_959
Mce related protein.
   0.988
BVIR_958
Putative ABC transporter ATP-binding protein.
 
    0.914
mlaE
Putative phospholipid ABC transporter permease protein MlaE.
 
  
 0.898
ycaD_1
Putative MFS-type transporter YcaD.
  
     0.540
BVIR_37
Hypothetical protein.
  
     0.528
BVIR_1929
Septum formation initiator.
  
     0.461
BVIR_3219
Hypothetical protein.
  
     0.449
ycjG
L-Ala-D/L-Glu epimerase.
       0.439
lptD_1
LPS-assembly protein LptD precursor; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.414
BVIR_961
Apolipoprotein A1/A4/E domain protein.
  
     0.409
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.