STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_963Hypothetical protein. (126 aa)    
Predicted Functional Partners:
BVIR_2758
TadE-like protein.
  
    0.788
BVIR_2759
TadE-like protein.
  
    0.773
BVIR_1614
PilZ domain protein.
  
     0.769
BVIR_2762
Type IV leader peptidase family protein.
  
    0.755
BVIR_2765
Pilus biogenesis CpaD protein (pilus_cpaD).
  
     0.753
BVIR_2867
Sel1 repeat protein.
 
     0.746
BVIR_1293
Hypothetical protein.
  
     0.738
BVIR_2766
Cell division inhibitor MinD.
  
    0.735
BVIR_185
Hypothetical protein.
  
     0.718
BVIR_540
Hypothetical protein.
  
     0.715
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
Server load: high (90%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.