STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yihYHypothetical protein. (376 aa)    
Predicted Functional Partners:
ubiE_2
Demethylmenaquinone methyltransferase.
 
     0.686
BVIR_102
Two-component response regulator.
 
     0.600
BVIR_2660
Blue-light-activated histidine kinase.
 
     0.586
BVIR_1661
Hypothetical protein.
 
     0.580
BVIR_1696
Blue-light-activated histidine kinase.
 
     0.485
BVIR_733
Blue-light-activated histidine kinase 1.
 
     0.446
BVIR_819
Blue-light-activated histidine kinase.
 
     0.430
treY
Maltooligosyl trehalose synthase.
  
     0.422
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.