STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP26054.1DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. (449 aa)    
Predicted Functional Partners:
SFQ44069.1
PAS domain S-box-containing protein.
  
0.957
SFQ17069.1
PAS domain S-box-containing protein.
 
 0.914
SFQ17046.1
PAS domain S-box-containing protein.
 
 0.912
SFP64875.1
PAS domain S-box-containing protein.
 
 0.907
SFP02438.1
Signal transduction histidine kinase.
 
 0.906
SFQ26833.1
Signal transduction histidine kinase.
 
 0.897
SFP63748.1
Signal transduction histidine kinase.
 
 0.805
SFQ30207.1
RNA polymerase, sigma 54 subunit, RpoN/SigL.
 
  
 0.803
SFP29893.1
RNA polymerase, sigma 54 subunit, RpoN/SigL.
 
  
 0.802
SFP34543.1
PAS domain S-box-containing protein.
   
 0.788
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.