STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP31959.1Tetratricopeptide repeat-containing protein. (724 aa)    
Predicted Functional Partners:
SFP82991.1
TPR repeat-containing protein.
 
  
  0.825
SFP99059.1
Tetratricopeptide repeat-containing protein.
  
  
  0.780
SFP32020.1
Tfp pilus assembly protein PilF.
  
     0.762
SFP05359.1
Tfp pilus assembly protein PilF.
 
  
  0.752
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.677
SFP44658.1
Tfp pilus assembly protein PilF.
 
     0.595
SFP16082.1
Hypothetical protein.
  
     0.574
SFP50382.1
Tfp pilus assembly protein PilF.
  
  
  0.545
SFP31935.1
Hypothetical protein.
       0.486
SFQ39761.1
Heptosyltransferase-3.
  
  
  0.476
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.