STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP32296.1Aldose 1-epimerase. (314 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 0.940
SFP08674.1
Putative hydrolase of the HAD superfamily.
  
 
  0.888
SFQ36845.1
Beta-galactosidase/beta-glucuronidase.
  
 
 0.878
SFQ42493.1
Glucokinase.
     
 0.873
SFP30266.1
Galactokinase; Belongs to the GHMP kinase family.
  
 0.862
SFQ07499.1
Galactokinase; Belongs to the GHMP kinase family.
  
 0.862
SFP88291.1
Alpha-galactosidase.
  
 
  0.861
SFQ38373.1
Beta-galactosidase.
 
 
 0.758
SFP87264.1
Glucokinase.
     
 0.729
SFQ07310.1
Mannose-6-phosphate isomerase, class I.
    
 0.686
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
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